Upload the comparison directory

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diff --git a/comparison/Inpla/sptestInpla.sh b/comparison/Inpla/sptestInpla.sh
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+++ b/comparison/Inpla/sptestInpla.sh
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+#!/bin/bash
+# $1: the source file name
+# $2: options
+# example: ./sptestInpla.sh A3_10.in '-x 100000'
+
+
+# repeat and waittime
+ct=1
+waittime=5
+
+max_threads=9
+
+# options
+source=$1
+inpla_seq='inplaSeq'
+inpla_para='inplaPara'
+opt=$2
+#dir_source='prog/'
+dir_make='../../'
+path_source="$dir_source$source"
+fname=`echo $1 | sed -e s'|.*/\(.*\)|\1|'`
+
+log="log-${fname}.txt"
+
+
+# main ------------------------------------------------------
+if [ -z $1 ]; then
+  echo "Usage: ./sptestInpla.sh filename option"
+  exit
+fi
+
+if [ ! -e $path_source ]; then
+  echo "$path_source is not found."
+  exit
+fi
+
+if [ ! -e $inpla_seq -a ! -e "${inpla_seq}.exe" ]; then
+  echo "Now making Inpla in the non-threaded version as '$inpla_seq'."
+  make -C "$dir_make" clean
+  make -C "$dir_make"
+if [ -e 'inpla.exe' ]; then
+  inpla_seq="${inpla_seq}.exe"
+  mv ../../inpla.exe ./$inpla_seq
+else
+  mv ../../inpla ./$inpla_seq
+fi
+fi
+
+if [ ! -e $inpla_para -a ! -e "${inpla_para}.exe" ]; then
+  echo "Now making Inpla in the multi-threaded version as '$inpla_para'."
+  make -C "$dir_make" clean
+  make -C "$dir_make" thread
+if [ -e 'inpla.exe' ]; then
+  inpla_para="${inpla_para}.exe"
+  mv ../../inpla.exe ./$inplla_para
+else
+  mv ../../inpla ./$inpla_para
+fi
+fi
+
+
+# -------------------------------------------------
+function mywait() {
+    for w in $(seq 1 $waittime) ; do
+	echo -n "."
+	sleep 1
+    done
+}
+
+function gettime() {
+  # $1: the execution command
+  rm -f _result.txt
+  for i in $(seq 1 $ct) ; do
+      (time $1) 2>> _result.txt
+      echo 
+      echo -n "Done ($i/$ct)"
+      if [[ $(($i + 1)) -le $ct ]]; then
+	  mywait
+	  echo 'Restart'
+      fi      
+  done
+  echo
+  echo
+  logtime=`grep real _result.txt | cut -f2 | sed -e "s/\(.*\)m\(.*\)s/\1 \2/" | awk -F' ' '{print ($1*60+$2)}'`
+  echo "Execution time"
+  echo "$logtime"
+  
+  # for return value
+  res=`echo "$logtime\n" | awk 'BEGIN{r=0;c=0} {r=r+$0;c++} END{print r/c}'` 
+ rm -f _result.txt
+}
+
+function puts_header() {
+  # $1: the name of the log file
+  # $2: a program name
+  # ex: puts_header $log
+
+  local alog
+  alog=$1
+
+  echo '' >> $alog
+  echo "$2,$ct" | awk -F',' '{printf("%-27s| avg. time over %d runs (sec)\n",$1,$2)}' >> $alog
+  echo '===========================+=============================' >> $alog
+}
+
+function do_experiment() {
+  # $1: execution command
+  # $2: the header string to put the logfile
+  # ex: do_experiment "$inpla -f $source $opt_special $opt"
+  echo -n 'Cooling CPU'
+  mywait
+  echo
+  echo "------------------"   
+  echo "$1"
+  gettime "$1"
+  echo "Average ${res}sec"
+  echo "$2,$res" | awk -F',' '{printf("%-27s| %.2f\n",$1,$2)}' >> $log
+}
+
+
+
+# clear the previous log
+rm -f $log
+
+
+puts_header $log "$source $opt"
+
+# Execution in sequential
+do_experiment "./$inpla_seq -f $path_source $opt" "non-thread"
+
+# Execution in parallel
+for ((thread=1; thread<=max_threads; thread++))
+do 
+  do_experiment "./$inpla_para -f $path_source $opt -t $thread" "-t $thread"
+done
+
+echo
+cat $log
+